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Merge pull request #196 from buyan-kh/fix/trim-pwm-absolute-threshold Test the library #498: Commit af271ad pushed by avantikalal
11m 33s main
main
11m 33s
Add optional absolute threshold to trim_pwm Test the library #497: Pull request #196 synchronize by avantikalal
10m 16s buyan-kh:fix/trim-pwm-absolute-threshold
buyan-kh:fix/trim-pwm-absolute-threshold
10m 16s
Merge pull request #194 from musharna/fix-update-ckpt-weights-only Test the library #496: Commit e6fd1d4 pushed by avantikalal
10m 17s main
main
10m 17s
Fix update_ckpt() failing on legacy checkpoints with torch >= 2.6 Test the library #495: Pull request #194 synchronize by avantikalal
10m 51s musharna:fix-update-ckpt-weights-only
musharna:fix-update-ckpt-weights-only
10m 51s
Test the library Test the library #494: Scheduled
12m 32s main
main
12m 32s
Enable DeepSHAP for Enformer models Test the library #493: Pull request #201 synchronize by avantikalal
14m 55s enable-enformer-deepshap
enable-enformer-deepshap
14m 55s
Fix output shape mismatch in deep_lift_shap convergence check Test the library #492: Pull request #203 opened by avantikalal
9m 50s fix-deepshap-output-shape
fix-deepshap-output-shape
9m 50s
Enable DeepSHAP for Enformer models Test the library #491: Pull request #201 synchronize by avantikalal
11m 17s enable-enformer-deepshap
enable-enformer-deepshap
11m 17s
Enable DeepSHAP for Enformer models Test the library #490: Pull request #201 opened by avantikalal
9m 59s enable-enformer-deepshap
enable-enformer-deepshap
9m 59s
allow custom genome and improve dataset creation performance Test the library #489: Pull request #191 synchronize by avantikalal
Action required MiqG:feat/custom-genome-dataset-performance
MiqG:feat/custom-genome-dataset-performance
Action required
Merge pull request #184 from LiudengZhang/feat/warn-chrom-overlap-fin… Test the library #488: Commit dd1096e pushed by avantikalal
8m 55s main
main
8m 55s
Warn when fine-tuning chromosomes overlap with pretraining data Test the library #487: Pull request #184 synchronize by avantikalal
9m 24s LiudengZhang:feat/warn-chrom-overlap-finetune
LiudengZhang:feat/warn-chrom-overlap-finetune
9m 24s
Warn when fine-tuning chromosomes overlap with pretraining data Test the library #486: Pull request #184 synchronize by avantikalal
9m 16s LiudengZhang:feat/warn-chrom-overlap-finetune
LiudengZhang:feat/warn-chrom-overlap-finetune
9m 16s
Merge pull request #197 from buyan-kh/fix/vep-tutorial-ref-alt Test the library #485: Commit a542651 pushed by avantikalal
8m 46s main
main
8m 46s
Fix reversed snpid allele order in VEP tutorial Test the library #484: Pull request #197 synchronize by avantikalal
7m 4s buyan-kh:fix/vep-tutorial-ref-alt
buyan-kh:fix/vep-tutorial-ref-alt
7m 4s
Merge pull request #200 from Genentech/fix/ledidi-ybar-shape Test the library #483: Commit 5818f81 pushed by avantikalal
8m 38s main
main
8m 38s
Fix ledidi() y_bar shape for ledidi>=2.2.0 Test the library #482: Pull request #200 opened by avantikalal
8m 48s fix/ledidi-ybar-shape
fix/ledidi-ybar-shape
8m 48s
Test the library Test the library #481: Scheduled
8m 17s main
main
8m 17s
Shift resized intervals to stay on chromosome Test the library #480: Pull request #199 opened by buyan-kh
30d 0h 0m 29s buyan-kh:cursor/resize-genome-bounds-300d
buyan-kh:cursor/resize-genome-bounds-300d
30d 0h 0m 29s
Accept interval columns by name regardless of order Test the library #479: Pull request #198 opened by buyan-kh
30d 0h 3m 49s buyan-kh:fix/resize-column-order
buyan-kh:fix/resize-column-order
30d 0h 3m 49s
Fix reversed snpid allele order in VEP tutorial Test the library #478: Pull request #197 opened by buyan-kh
9m 33s buyan-kh:fix/vep-tutorial-ref-alt
buyan-kh:fix/vep-tutorial-ref-alt
9m 33s
Add optional absolute threshold to trim_pwm Test the library #477: Pull request #196 opened by buyan-kh
3m 42s buyan-kh:fix/trim-pwm-absolute-threshold
buyan-kh:fix/trim-pwm-absolute-threshold
3m 42s
Fix predict_on_seqs OOM via batched Trainer.predict Test the library #476: Pull request #195 opened by buyan-kh
30d 0h 4m 38s buyan-kh:fix/predict-on-seqs-oom
buyan-kh:fix/predict-on-seqs-oom
30d 0h 4m 38s
Fix update_ckpt() failing on legacy checkpoints with torch >= 2.6 Test the library #475: Pull request #194 opened by musharna
9m 48s musharna:fix-update-ckpt-weights-only
musharna:fix-update-ckpt-weights-only
9m 48s
Test the library Test the library #474: Scheduled
8m 28s main
main
8m 28s