Issues

• [feature] : Make quadratic polynomial removal disabled by default

  enhancement
  AFM-SPM/TopoStats#1403 · Filter by author SylviaWhittle opened on Oct 5, 2026

• Missing dependency for Marimo notebooks

  bugpackaging
  AFM-SPM/TopoStats#1402 · Filter by author ns-rse opened on Sep 29, 2026
  

• [feature] : centre of volume measurement

  enhancement
  AFM-SPM/TopoStats#1401 · Filter by author SylviaWhittle opened on Sep 23, 2026

• [bug]: Center x and Center y are not calculated correctly

  bug
  AFM-SPM/TopoStats#1400 · Filter by author tcatley opened on Sep 18, 2026

• [feature] : Make logs output in the output directory

  enhancement
  AFM-SPM/TopoStats#1398 · Filter by author SylviaWhittle opened on Sep 4, 2026

• [bug]: Traditional multiclass thresholding has error in outputs

  bug
  AFM-SPM/TopoStats#1397 · Filter by author tcatley opened on Sep 3, 2026
  

• [bug]: Graincrop __str__ method fails when skeleton is None

  bug
  AFM-SPM/TopoStats#1396 · Filter by author SylviaWhittle opened on Aug 28, 2026
  1

• [bug]: node masks absent for third node onwards in each grain

  bug
  AFM-SPM/TopoStats#1392 · Filter by author phooda1 opened on Aug 5, 2026

• [bug]: .SPM duplicate files while processing

  bug
  AFM-SPM/TopoStats#1391 · Filter by author phooda1 opened on Aug 5, 2026
  1

• Snapshot tests running slowly with syrupy >=5.5

  AFM-SPM/TopoStats#1383 · Filter by author ubdbra001 opened on Jul 15, 2026
  2

• Improve dataclass instantiation and typing

  classesrefactor
  AFM-SPM/TopoStats#1375 · Filter by author ns-rse opened on Jun 30, 2026
  

• [bug]: (damage branch) nodestats : key error : 'avg_mask'

  bug
  AFM-SPM/TopoStats#1369 · Filter by author SylviaWhittle opened on Jun 16, 2026
  6

  

• Test out PerovStats skeletonisation in TopoStats

  AFM-SPM/TopoStats#1367 · Filter by author tobyallwood opened on Jun 10, 2026
  1

  

• [bug]: topoly breaks matplotlib plots when imported into a notebook

  bug
  AFM-SPM/TopoStats#1360 · Filter by author tobyallwood opened on Jun 4, 2026
  4

• [feature] : Use properties in pydantic dataclasses to eliminate None uncertainty for to-be-assigned attributes

  enhancement
  AFM-SPM/TopoStats#1335 · Filter by author SylviaWhittle opened on Apr 10, 2026
  1

  

• Tpyo in docstring for topostats/measure/__init__.py

  Low Priority
  AFM-SPM/TopoStats#1327 · Filter by author ns-rse opened on Apr 7, 2026

• tests: precision errors

  tests
  AFM-SPM/TopoStats#1322 · Filter by author ns-rse opened on Mar 26, 2026

• [feature] : Moving disordered_tracing from the all dataset to core

  enhancement
  AFM-SPM/TopoStats#1319 · Filter by author tcatley opened on Mar 25, 2026

• [typing] Validate all calls using pydantic.validate_call() decorator

  typing
  AFM-SPM/TopoStats#1314 · Filter by author ns-rse opened on Mar 12, 2026
  1

• [feature] : Config file versioning & custom error for out of date configs?

  enhancementgood first issue
  AFM-SPM/TopoStats#1307 · Filter by author SylviaWhittle opened on Mar 3, 2026
  3

  

• SIM105 : try: ... except: pass > contextlib.suppress()

  Low Prioritytests
  AFM-SPM/TopoStats#1300 · Filter by author ns-rse opened on Feb 17, 2026

• [feature] : Identify differences in images at different times

  enhancement
  AFM-SPM/TopoStats#1296 · Filter by author SylviaWhittle opened on Feb 11, 2026
  1

• [feature] : Add __copy__ and __deepcopy__ methods to classes.

  classesenhancement
  Feature

  AFM-SPM/TopoStats#1295 · Filter by author ns-rse opened on Feb 11, 2026
  1

• [feature] : Don't use multiprocessing when config["cores"] == 1.

  enhancement
  AFM-SPM/TopoStats#1283 · Filter by author SylviaWhittle opened on Jan 22, 2026
  1

• Handover notes

  AFM-SPM/TopoStats#1280 · Filter by author ns-rse opened on Jan 14, 2026