Issues

• Plots issues for axis text overlapping

  ryanlayer/samplot#207 · Filter by author liuyang2006 opened on Sep 30, 2025
  1

• GRCh38 Gene Annotation

  ryanlayer/samplot#206 · Filter by author yueyaog opened on Sep 29, 2025

• visualize complex SVs

  ryanlayer/samplot#205 · Filter by author ywzhang071394 opened on Feb 2, 2025

• Question regarding Samplot output labels

  ryanlayer/samplot#204 · Filter by author Daxton-Furniss opened on Jan 22, 2025
  2

• Feature Request: Changing the color of the coverage plot

  ryanlayer/samplot#199 · Filter by author Rohit-Satyam opened on Jun 3, 2024
  1

• Question about plot interpretation; large putative inversion

  ryanlayer/samplot#198 · Filter by author jphruska opened on May 31, 2024
  3

• Image size of 2400x165270 pixels is too large. It must be less than 2^16 in each direction.

  ryanlayer/samplot#197 · Filter by author jingydz opened on May 8, 2024

• KeyError: 'Name'

  ryanlayer/samplot#196 · Filter by author jingydz opened on May 8, 2024

• plot with transcripts error

  ryanlayer/samplot#190 · Filter by author abrusell opened on Nov 9, 2023
  2

• Issues with using the samplot vcf module

  ryanlayer/samplot#187 · Filter by author karen916 opened on Oct 9, 2023
  3

• how to obtain read names / co-ordinates to inspect on IGV

  ryanlayer/samplot#185 · Filter by author proukakis opened on Jun 30, 2023
  3

• svtype = variant.info.get("SVTYPE", "SV")

  ryanlayer/samplot#181 · Filter by author okendojo opened on May 26, 2023
  6

• help to interpret Samplot for long reads and how to confirm plots for hundreds of variants

  ryanlayer/samplot#180 · Filter by author shaghayeghsoudi opened on May 22, 2023

• interpreting samplot deletion

  ryanlayer/samplot#175 · Filter by author prasundutta87 opened on Dec 28, 2022

• Is the package still working

  ryanlayer/samplot#174 · Filter by author akhilpampana opened on Dec 14, 2022
  4

• Translocations - CTX

  ryanlayer/samplot#173 · Filter by author AriadnaColmeneroCobo opened on Dec 12, 2022
  4

• Installation issue

  ryanlayer/samplot#172 · Filter by author min-codes opened on Nov 25, 2022
  2

• Get only the affected transcript in annotation

  ryanlayer/samplot#167 · Filter by author prasundutta87 opened on Nov 2, 2022

• legend name query

  ryanlayer/samplot#166 · Filter by author prasundutta87 opened on Oct 13, 2022

• no plottable samples with matched alignment files

  ryanlayer/samplot#164 · Filter by author Duda5 opened on Sep 21, 2022
  5

• Incorrect x-axis genomic coordinates in --zoom mode

  ryanlayer/samplot#163 · Filter by author ManavalanG opened on Aug 31, 2022
  2

• get_tabix_iter: reason for interval extension

  ryanlayer/samplot#161 · Filter by author mchowdh200 opened on Jul 18, 2022

• Non-integer molecular identifiers (MI)

  ryanlayer/samplot#159 · Filter by author ghost opened on May 13, 2022

• pre-trained ML/CNN model

  ryanlayer/samplot#156 · Filter by author cluhaowie opened on Apr 13, 2022
  1

• New release?

  ryanlayer/samplot#155 · Filter by author pontushojer opened on Apr 13, 2022